ATLAS Browser-Based Viewer

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ATLAS
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  • Waypoints

    Waypoints

     

    delete all
    Waypoint List
    • Distance Table

      Distances

      Two waypoints or more are required to display the distance table.
       All distances are in μm.
    • File Information

      Information

      Reload
    • um

      Measurement Tools

      Create Horizontal Measurement
      Create Vertical Measurement
      Create Point-to-Point Measurement
      Create Angular Measurement
      Create Ruler
      Create Rectangular Area
      Create Circular Area
      Create Annotations
      Export Selected Area
      Create Rectangle
      Create Circle Annotation
      Create Line Annotation
      Delete
      Delete All
      Lock Measurements to FOV ?

      Holding CTRL while moving a node of any measurement tool will lock the tool angle to multiples of 15°.

    • Save/Load

      Save / Load

      Save
      Load
      Save to XML
      Delete existing data on load?
      Assign existing settings to loaded data?

      Save and restore the annotations, the views and the waypoints from the current browser session.

      To save the current field of view, use the save button located in the footer of the application.

    • About ATLAS

      About ATLASTM

      About
      Designed for Carl Zeiss
      Designed by
      Fibics Inc.
      Visit ATLAS Website
      Version 1.2.2141
      Notice

      The ATLAS Browser-Based Viewer will work with most web browsers.

      This application exclusively uses Javascript, HTML5 and CSS3.

      The ATLAS Browser-Based Viewer has been optimized for Google Chrome 7.0+.

    • Overview Overlay

      Overview Overlay

      Show Overview
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    Your browser is not supported.

    Warning

    Please upgrade to a modern browser.

    The ATLAS Browser-Based Viewer is optimized for Google Chrome 8.


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    Stop Slide Show

    Showing View 4 of 7

    Please confirm you want to delete all Waypoints

    Please confirm you want to delete all measurements

    The views, the measurements and the way points have been saved.

    Please confirm you want to delete all the views

    Enter the desired image scale.

    %
    μm
    °

    Enter the desired angle

    °

    Enter the desired dimensions

    μm
    μm

    Enter the desired radius

    μm

    Enter the desired magnification to display.

    X

    Enter the desired pixel size to display.

    nm
    Annotation are limited to 200 chararacters.

    second(s)
    		 Press "Enter" to change view
    Display View Info ?
    Transition Mode
    Loop ?
    Daisy Chain Slide Show ?
    Slide Show Link List

    If the slide shows are daisy chained, the following slide shows will be run sequentially.

    Please measure the length of this red line with a ruler and input the value below.

    Note: This calibration is monitor dependent.

    Enter the desired image width.

    μm

    Please enter a scale bar value

    μm
    Scale Bar Type

    Scalebar will be modified if the image scale is too large.



    Center μm
    Width / Height μm

    Go To

    In order to work properly, the ATLAS Browser-Based Viewer needs to have the following data.

    nm
    Save Image Preview
    Warning

    Cannot Save Image

    An error has occured when trying to save the current view.

    Settings
    Include Measurements

    Refresh Image

    If the image does not show or some tiles are missing, try pressing the refresh image button.
    How to save the image
    1. Right-Click on the image.
    2. Select "Save Image As".
    3. Choose a local destination.
    4. Press "Save".
    Image Info
    Image Width pixels
    Image Height pixels
    Pixels Megapixels

    The image may have been shrunk to fit in this windows. It will be full size once saved.

    Measurements
    Shape
    Text
    Solid Background ?
    Show Call-Out Tail ?
    Fill
    Draw Fill ?
    Opacity
    Show Angle for Length Measurements ?
    Views
    Zoom Out Before Going to View ?
    Crosshair
    Reset to Default Settings
    Warning

    The ATLAS Browser-Based Viewer cannot retreive the image when run locally.

    If your are running Chrome locally, close all instances of Chrome and start it using :
    chrome --allow-file-access-from-files

    Loading
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    Settings
    Include Measurements

    Refresh Image

    If the image does not show or some tiles are missing, try pressing the refresh image button.
    How to save the image
    1. Right-Click on the image;
    2. Select "Save Image As" ;
    3. Choose a local destination.
    4. Press "Save"
    Image Parameters
    Width
    Height

    Loading saved data will delete all the existing waypoints, views and measurements.

    Do you want to continue ?

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    Brightness
    Contrast
    Apply
    Reset

    The following code includes the waypoints, the annotations and the saved views.

    Replace the WHOLE content of the mosaicinfo.js file located at with the following XML code.

    It was detected that the current browser zoom level is different than 100%.

    The ATLAS Browser-Based Viewer strongly recommends the browser to be set to 100%.

    In most browser, pressing CTRL+0 will set the zoom level to 100%.


    It appears that the browser you are currently using is not hardware accelerated.

    For an improved user experience it is strongly recommended to update your browser and/or to install any of the following browsers:

    Mozilla
    Firefox 4.0+
    Google
    Chrome 12+
    Apple
    Safari 5.0+
    Microsoft
    Internet Explorer 9+
    for Windows Vista and 7 only

    The current mosaic has been added to the daisy chain list.

    To view the current list, press "Start Slide Show" in the ATLAS view menu.